PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_014103
Common NameC-EF5
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 223aa    MW: 24686.6 Da    PI: 5.289
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_014103genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.7e-183080155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +++kGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa  +l+g
  DCAR_014103 30 KKFKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALICLKG 80
                 59*****998.**********9...336************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.57E-183089No hitNo description
PfamPF008478.1E-113180IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-193188IPR016177DNA-binding domain
SMARTSM003803.2E-343194IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-293189IPR001471AP2/ERF domain
PROSITE profilePS5103221.2983188IPR001471AP2/ERF domain
PRINTSPR003671.6E-83243IPR001471AP2/ERF domain
PRINTSPR003671.6E-85470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MTRAESDGSG ISAGKKLSAQ TPSSVNKKMK KFKGVRMRSW GSWVSEIRAP NQKTRIWLGS  60
YSTAEAAARA YDAALICLKG PSANLNFPAF SQQHFTPYIN DQITSMSPKA IQRIAAQAAN  120
TFLDNATPLP SPPPLSSASS ASSSPSNNIE DDVSLAFEDH YKPDETVMNV NAPWMFNNDF  180
GSFKFRDMID DMLLFDDQQP SMMINHDHVY EGEEDLRLWD FC*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB1882930.0AB188293.1 Daucus carota C-EF5 mRNA for embryonic element binding Factor 5, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017244989.11e-166PREDICTED: ethylene-responsive transcription factor ERF014-like
TrEMBLA0A165XU841e-165A0A165XU84_DAUCS; Uncharacterized protein
STRINGGorai.010G048900.14e-45(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61772435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-36ERF family protein