PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_013839
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 303aa    MW: 32853.1 Da    PI: 4.6734
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_013839genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-173585155
          AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 ++++GVr++  +g+Wv+eI +       r kr +lg+f tae Aa a+++a+ kl+g
  DCAR_013839 35 CKFRGVRQRT-WGKWVSEISElN-----RgKRTWLGTFATAEAAAMAYDEAAVKLFG 85
                 79*****999.*******77733.....45************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.3E-123584IPR001471AP2/ERF domain
CDDcd000181.57E-153594No hitNo description
PROSITE profilePS5103220.9693693IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-203694IPR016177DNA-binding domain
SMARTSM003803.2E-343699IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-283694IPR001471AP2/ERF domain
PRINTSPR003672.3E-93748IPR001471AP2/ERF domain
PRINTSPR003672.3E-95975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MSKALSLRSA KSVMKVSQSS PRGRRTRGGP DNSSCKFRGV RQRTWGKWVS EISELNRGKR  60
TWLGTFATAE AAAMAYDEAA VKLFGSDAKI NFPERLPQVS CPVQATAPTS EIPEEGIVEL  120
QQGEDPPAMA YDKAAGKLSG GYAKLSENIP QVSCPVHTRA TTSKDTLIYS EGIKTPGGLT  180
EMEQVACPPG PEFSLTTIQY DCLINDLLIG NFDYVMKKQS DVARIVNHVD LQGDKVGKNE  240
GNLGEKLIVE LPKSDGSTLW DEIMATTDLE KIKNPEDFSA GDLDDVFKDI LEDDLGIDIS  300
GF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-163796363ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017246899.10.0PREDICTED: ethylene-responsive transcription factor ERF034-like isoform X2
RefseqXP_017246900.10.0PREDICTED: ethylene-responsive transcription factor ERF034-like isoform X2
TrEMBLA0A165Y4720.0A0A165Y472_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-21ERF family protein