PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_012848
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 364aa    MW: 41274.9 Da    PI: 7.5317
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_012848genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.97.1e-1177110538
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                  k +rr+++NReAAr+sR+RKka++++Le+   +L
  DCAR_012848  77 KLQRRLAQNREAARKSRLRKKAYVQQLETSRLKL 110
                  89**************************865554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-773144IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.1475117IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.21E-677117No hitNo description
PfamPF001708.7E-877117IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-777121No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141442.2E-27167240IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MASPSTQFAT ARRMGIYDTL HQISMWEDVL GGGVSPETCT SPNMKEDARL INKTEYTSQE  60
SLGPSSDNQA AKILSEKLQR RLAQNREAAR KSRLRKKAYV QQLETSRLKL AQLEQDLDRT  120
RQQGVYTGGA LNMGNAGFSS TMNSDAGLIT FGMEYELWLE EQEKMNCELK NMLQAHISDA  180
QLRMFVESGL NHYADLFRMK ADAARCNVFY LMSGMWRTTV ERIFLWIGGF RPSEILKIIR  240
PQLEPLTEQQ LASVSSLRHS CQQAEDALSQ GMEKLQQTLT QCVTDSSSGL SNYNCQMVTA  300
MERLDSLESF MIQADHLRQQ TLQQMFHILT VRQAARGLVA FGEYFQRLRA ISSLWDARSH  360
QHT*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017248522.10.0PREDICTED: transcription factor TGA1-like isoform X2
RefseqXP_017248524.10.0PREDICTED: transcription factor TGA1-like isoform X2
SwissprotQ392371e-140TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A162AES90.0A0A162AES9_DAUCS; Uncharacterized protein
STRINGVIT_18s0001g04470.t011e-168(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-142bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]