PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_012671
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 223aa    MW: 25437.7 Da    PI: 10.3535
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_012671genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.56e-12109150351
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                   +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  DCAR_012671 109 MRGVYF--KNMKWQAAIKVE-----KKQIHLGTVGSQEEAARLYDRAAF 150
                  79**98..47*********6.....6********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.5E-6108151IPR001471AP2/ERF domain
SuperFamilySSF541715.56E-8108153IPR016177DNA-binding domain
SMARTSM003807.9E-5108165IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-6111155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MVSIRRRRLL GLCTGKSSFL APVPKTFDGG QTPENGTQNP TPFCTTPVPS IDLDQVKENG  60
ISKVHPRSSN MSTSSSSKEQ QPQQFSVPEV KRRKRHRRKH FENQEPCIMR GVYFKNMKWQ  120
AAIKVEKKQI HLGTVGSQEE AARLYDRAAF MCGREPNFEL SEEDKKELRK LNWEEFLSLT  180
RSAIASKKQQ RRTEFSSRRK LEPADNNNYW EAGQGGFSGS EE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017238152.11e-166PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A161WYX31e-165A0A161WYX3_DAUCS; Uncharacterized protein
STRINGXP_010242670.14e-90(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-47ERF family protein