PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_010972
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 227aa    MW: 26065.6 Da    PI: 10.3541
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_010972genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP130.12.2e-4061492133
          TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssaseceaesssssasnss 86 
                  + +kdrhski T++g+RdRRvRls+++a+rfFdL d L fdk+s+t+ WLl++++pai++l+++                          s +++   
  DCAR_010972   6 TFRKDRHSKILTAQGPRDRRVRLSIQVARRFFDLHDTLRFDKASETLGWLLTNSQPAIDDLVKNkrsscaavdegcsR------------SDTTE--- 88 
                  569*************************************************************44333333222210............11111... PP

          TCP  87 sg...............kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                   +               ++ +++  s + +++a+ a+ la+esrakarararertr+km+ +
  DCAR_010972  89 -AaemrdkhymknttsiDNTQDQRVSMQLEEKAKLASLLARESRAKARARARERTRQKMCVR 149
                  .1112233344555665555555566666666666799999*******************88 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036346.0E-397147IPR005333Transcription factor, TCP
PROSITE profilePS5136931.709866IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137011.361128145IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MKPPHTFRKD RHSKILTAQG PRDRRVRLSI QVARRFFDLH DTLRFDKASE TLGWLLTNSQ  60
PAIDDLVKNK RSSCAAVDEG CSRSDTTEAA EMRDKHYMKN TTSIDNTQDQ RVSMQLEEKA  120
KLASLLARES RAKARARARE RTRQKMCVRH LLGTNKLLPH DFRIAANHLS TWNELSYLHN  180
ISCRAPYFSV GTDQVGQSRN PELLSETSKY SLHLFYMSIL TFDQSN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017241142.11e-154PREDICTED: transcription factor CYCLOIDEA
TrEMBLA0A166B1861e-168A0A166B186_DAUCS; Uncharacterized protein
STRINGXP_010265281.18e-29(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24362359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.23e-22TCP family protein