PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_008395
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 173aa    MW: 18675.9 Da    PI: 7.7305
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_008395genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP99.75.2e-3123101481
          TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssss 81 
                  +k  +  + + v+gR RR+Rl+a+caar+F+L++eLG+++d++tieWLl+ a+pai+ +tgt++++a+++ + +s + s
  DCAR_008395  23 AKPVNTERNSRVNGRSRRIRLPAKCAARVFQLTRELGHKTDGQTIEWLLRRAEPAIIRATGTGTIPAHATvTYGSMRAS 101
                  67778889999*****************************************************999766533333322 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136922.3712781IPR017887Transcription factor TCP subgroup
PfamPF036349.3E-2828125IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MASSSKTALP KTAATKDHRD SAAKPVNTER NSRVNGRSRR IRLPAKCAAR VFQLTRELGH  60
KTDGQTIEWL LRRAEPAIIR ATGTGTIPAH ATVTYGSMRA SGRSVAAPLS GSGVEPQGSE  120
PSVGSGNVEY PERGYMSLLM DPMEEAELQH HEERLWVEIS DEVENGNVIA QD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017233775.18e-52PREDICTED: transcription factor TCP21-like
TrEMBLA0A166FAN91e-123A0A166FAN9_DAUCS; Uncharacterized protein
STRINGGSMUA_Achr7P20990_0016e-34(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.15e-34TCP family protein