PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_008392
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 183aa    MW: 19445.2 Da    PI: 9.5662
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_008392genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1081.5e-3342115483
          TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83 
                   k   + +h+kv+gR RRvR++a caar+F+L++eLG+++d++tieWLl+qa+p+i+ +tgt++++a+ +      +s+ 
  DCAR_008392  42 NKPVAKERHSKVNGRARRVRMPAVCAARVFQLTRELGHKTDGQTIEWLLRQAEPEIINATGTGTKPAQLS------VSSP 115
                  678899********************************************************99999222......1111 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036347.0E-2946125IPR005333Transcription factor, TCP
PROSITE profilePS5136924.83346100IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MASFSKPAVS IEAAASHNAL IPKDSLSAAK GKKRVVKEGK ANKPVAKERH SKVNGRARRV  60
RMPAVCAARV FQLTRELGHK TDGQTIEWLL RQAEPEIINA TGTGTKPAQL SVSSPAKPAS  120
EASVAAPLSG SVMNPENFVQ GGNGLGVAPE VEYQTGGFMS LLMDPMIGEE ELQQHEEYLL  180
QM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017233776.11e-132PREDICTED: transcription factor TCP21-like
RefseqXP_017233778.11e-132PREDICTED: transcription factor TCP21-like
TrEMBLA0A166FAM01e-130A0A166FAM0_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.18e-38TCP family protein