PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_008218
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 392aa    MW: 41119.4 Da    PI: 6.6128
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_008218genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.44.1e-20315377163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ el++ ++e+++  +++
  DCAR_008218 315 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENASLRAELSRASNEYEQALAQN 377
                  89*******************************************************988776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.6E-2711100IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.3E-45139282No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-17309373No hitNo description
PfamPF001703.7E-18315377IPR004827Basic-leucine zipper domain
SMARTSM003381.5E-19315379IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.231317372IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.31E-10318372No hitNo description
CDDcd147024.00E-26320370No hitNo description
PROSITE patternPS000360322337IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MGSSGMDKSP KDVKEAKEPK TPTSQEQVSS AAAAAGPVTP DWSGFQAYSP MPPHGYMASS  60
PQAPHPYMWG VQHMMPPYGT PPHPYVMYPH GGIYAHPSMP PGSYPFSPFA MPSPNGVAEA  120
FVNTPGSTEA DGKVSEGKEK LPIKRSKGSL GSLNMITGKN SEGSKTSGAP ANGGYSKSGD  180
SASDGSTEEG SDDANSQNDS QIKSGSRQDS LEGVHLANGE ASQNGSAHGL QNGQNASHTL  240
VNQPMSTVPI SAGGSAGVIP GPTTNLNIGM DYWGGPTSSA VPAMRGKVPS PPVTGGIVSG  300
GARDNVQPQL WLQDERELKR QRRKQSNRES ARRSRLRKQA ECDELAQRAE VLKEENASLR  360
AELSRASNEY EQALAQNALL KEKIGVPGEE D*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1331337RRSRLRK
2331338RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankY108100.0Y10810.1 P.crispum mRNA for bZIP DNA-binding protein CPRF4b.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017235759.10.0PREDICTED: bZIP transcription factor 16-like
SwissprotQ501B21e-151BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A166F6020.0A0A166F602_DAUCS; Uncharacterized protein
STRINGEMJ104010.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30652446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-151basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]