PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_007742
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 205aa    MW: 21918.2 Da    PI: 4.9956
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_007742genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.36e-162880155
          AP2  1 sgykGVrwdkkrgr..WvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                 + y+GVr++k+ g+  Wv+eIr+p     r   r++lg+f +ae+Aa a++ a+++l+g
  DCAR_007742 28 PVYRGVRRRKS-GSgkWVSEIREP-----RspNRIWLGTFSSAEMAAVAYDVAALALKG 80
                 68****88884.5556*******9.....4489***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.0E-92880IPR001471AP2/ERF domain
SMARTSM003808.0E-312994IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-202990IPR016177DNA-binding domain
PROSITE profilePS5103222.4842988IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-282990IPR001471AP2/ERF domain
CDDcd000183.62E-283090No hitNo description
PRINTSPR003674.8E-93041IPR001471AP2/ERF domain
PRINTSPR003674.8E-97090IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MERYSSSSFD ANNSSPPGSG SPSSGRHPVY RGVRRRKSGS GKWVSEIREP RSPNRIWLGT  60
FSSAEMAAVA YDVAALALKG KDAELNFPDS ASSLPVPASA SPRDIQAAAA IAASAAGAAV  120
DTFRGVDRTT NTRAMIADPN INTNNNVIAS RVDHDNNFVD EDMIFDMPNI LVNMAHGMLL  180
SPPRMNVEAD FDPDYAGDNL WNYP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1327881272Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017233662.11e-146PREDICTED: ethylene-responsive transcription factor ERF024
SwissprotQ9SJR04e-55ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A166ES111e-144A0A166ES11_DAUCS; Uncharacterized protein
STRINGXP_009793202.11e-64(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.18e-27ERF family protein