PlantTFDB
Plant Transcription Factor Database
PlantRegMap/PlantTFDB v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_007350
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family GRAS
Protein Properties Length: 519aa    MW: 59082 Da    PI: 4.3335
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_007350genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS125.18.4e-391605189374
         GRAS   9 AeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleav 106
                   ea+++g+  l++a+++r +e a p+g++ qRl+ yf++ L++++          l+  ++s    +    a+ ++++++P+ +f+h++aN+ Il+a+
  DCAR_007350 160 GEAIENGQVDLVDAIVKRFEEKADPTGETYQRLVYYFVQSLEKHMDY--------LR--QES---FKIFKPAFLALYQIFPYGRFAHFLANSEILNAM 244
                  589******************************************98........22..222...3344456778*********************** PP

         GRAS 107 egeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                   ++ ++ i+Dfdi++GlQWp+L++ L   ++ p  +++  +   e +        + eet+++L + A+ +++++e+  +   ++e+l +ee ++k+ 
  DCAR_007350 245 PQDAEMTIVDFDIGEGLQWPSLFEFLGR-KKHPCLVKLILIRWDEDNnnastCLWKFEETKRQLYEHARCCNLKLEIVEM---SMEEL-TEETKTKRS 337
                  ***********************99986.5777899999987655555566677899*******************9876...89999.8899***** PP

         GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvk.......slsPkvvvvveqeadh..nsesFlerflea.leyysalfdsleaklpres.eerikvE 286
                  E +  n++ +l ++  +s s++s   e+Lk+ k       s+++ ++++ +  ++   n+ s +  flea + +  al++s++  lp +  e+r  +E
  DCAR_007350 338 EWITFNCMTNLPHMG-RSRSTKS-VIEFLKIAKgsincdgSTKSGIITFGDGLMEErkNDCSGFGSFLEArMLHLHALLESMDLHLPFQLiEARLAME 433
                  **************8.5556665.678888887544444468999*****97665544666666666666378999***********99978899999 PP

         GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaWr 374
                    ++++  ++  ac +++     e+ +   + +++ G++  +ls++  ++ + ll + ++ gy ++   e+++++vlg k+++Lv vS+W+
  DCAR_007350 434 CLFVAPYMSS-FACLQNW-----EEISFGVDGFSMLGLEGKRLSQDSIAEGQELLGERGMSGYWIKnqgENENEIVLGYKGNTLVKVSCWK 518
                  8877766665.5666666.....456667899**********************************77777*******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098518.177126495IPR005202Transcription factor GRAS
PfamPF035142.9E-36160518IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    Send to blast
MMQQGELLEV TWPYNTGNFS FDGVELYGLD MCNNFGSLDF SPSFLSATPD YSSEISSPDQ  60
YLSSGPSDGS HNCLEFRHQL PKLEESQMIG NSETGVIFDE VSCLSELMEL ENSYYSKEVL  120
SDNKDYSLEV PSAQLSICFP QEDVEIDIQL SICYLIQAYG EAIENGQVDL VDAIVKRFEE  180
KADPTGETYQ RLVYYFVQSL EKHMDYLRQE SFKIFKPAFL ALYQIFPYGR FAHFLANSEI  240
LNAMPQDAEM TIVDFDIGEG LQWPSLFEFL GRKKHPCLVK LILIRWDEDN NNASTCLWKF  300
EETKRQLYEH ARCCNLKLEI VEMSMEELTE ETKTKRSEWI TFNCMTNLPH MGRSRSTKSV  360
IEFLKIAKGS INCDGSTKSG IITFGDGLME ERKNDCSGFG SFLEARMLHL HALLESMDLH  420
LPFQLIEARL AMECLFVAPY MSSFACLQNW EEISFGVDGF SMLGLEGKRL SQDSIAEGQE  480
LLGERGMSGY WIKNQGENEN EIVLGYKGNT LVKVSCWK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017233614.10.0PREDICTED: nodulation-signaling pathway 2 protein-like
TrEMBLA0A162AVM20.0A0A162AVM2_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53611938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.16e-17GRAS family protein