PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_006849
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 276aa    MW: 30770.5 Da    PI: 8.1347
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_006849genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18122172255
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr ++ +g+++AeIrdp   + k  r++lg++ t+ eAaka+++a+ kl+g
  DCAR_006849 122 HYRGVRKRP-WGKFAAEIRDP---KrKGSRIWLGTYVTPIEAAKAYDKAAYKLRG 172
                  7********.**********8...4334*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.4E-30121181IPR001471AP2/ERF domain
PROSITE profilePS5103223.446122180IPR001471AP2/ERF domain
PfamPF008471.9E-12122172IPR001471AP2/ERF domain
CDDcd000185.74E-18122180No hitNo description
SuperFamilySSF541711.77E-21122182IPR016177DNA-binding domain
SMARTSM003804.2E-34122186IPR001471AP2/ERF domain
PRINTSPR003671.8E-13123134IPR001471AP2/ERF domain
PRINTSPR003671.8E-13162182IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MATATETSAL DLIERHLFLD IFSPVVDSSQ LEEYAKFLAS DPSSSPISSS SSSCFSSSSI  60
SLSSIQINSC TTNSTHQNNP SEHHLSRDEK LVDFTNIDSW SKKNKVNPSR GCNKSGEIDF  120
RHYRGVRKRP WGKFAAEIRD PKRKGSRIWL GTYVTPIEAA KAYDKAAYKL RGSKAILNFP  180
LEIAKSSGLP NKHENEEIKK ANKENKERVL VQPKVCDNNS SGEVCQPPLE SRFASFCWPG  240
SMDLWGDGEM SMLDFPLLSP SSHYYPSIES QHRMV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-28121183163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017233556.10.0PREDICTED: ethylene-responsive transcription factor ERF107-like
TrEMBLA0A166E2S50.0A0A166E2S5_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-25ERF family protein