PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_004450
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 306aa    MW: 34382.7 Da    PI: 4.6068
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_004450genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.81.8e-104179446
          AP2  4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaa 46
                  GVr +  r rWvAeI +p++  k+ r ++g+f t eeA ka+
  DCAR_004450 41 EGVRMK--RSRWVAEIEHPKK--KNVRMWIGSFATQEEASKAY 79
                 699864..57********965..35*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.223998IPR001471AP2/ERF domain
SMARTSM003802.1E-43998IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-124186IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-84286IPR016177DNA-binding domain
PfamPF008474.4E-54284IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MAKKNCRKSV TKNLATSYFT VRKTRRHAVC LSEKQVPMKL EGVRMKRSRW VAEIEHPKKK  60
NVRMWIGSFA TQEEASKAYQ MRKMELEEIK FKDAVKKDKF VGDQEVEAFC DDGDDGVVVC  120
DDQVMKGVDF DGEKNGVTIE GVRICLGSYT AQEEASKAYQ SEKMEHEKLK LRAIARKDNL  180
GDDQEVVSGH EESNAESLPD NSDVVVKLAD FDDQVATLVG FDDANIVESR GESQSDDCDV  240
SVNVIGSDDQ AMEVIHIDYQ AERSLSRRIV EQEAVDMLLQ SGPILMDRYG CLLGEFSWMD  300
DLSIV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A166J4Y50.0A0A166J4Y5_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.28e-09ERF family protein