PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_002636
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family G2-like
Protein Properties Length: 268aa    MW: 29356.5 Da    PI: 6.281
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_002636genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like48.91.4e-1510382755
      G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                 AtPk +l+lm+v gLt++hvkSHLQ+YR+
  DCAR_002636 10 ATPKLVLQLMDVRGLTISHVKSHLQMYRS 38
                 9***************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.3E-5839IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-10939IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.603.3E-141039IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MSSCARTGGA TPKLVLQLMD VRGLTISHVK SHLQMYRSMK TDPNVEEGGS SFVNQSRKKG  60
CKEEEDDNDG SIEEETSVGY LASLQKPLMQ VSNSHHSHFG FNTSPKPPAK RARITDQNLQ  120
CNQHETMSMN RYSYKSYMGA QKSEEDPIST AFSPAHQFFH NLSLFTHALM GDSYLPEVAE  180
QEDKACTAVR RKRKLDEDPL NPENIHDGCG LSLSLSLQHP STQKSNASSM SDISEAISSS  240
YFNANLSNST GSSQELNLDL SISLSGA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017216707.10.0PREDICTED: putative two-component response regulator ARR13
TrEMBLA0A166H9N00.0A0A166H9N0_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54332238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.11e-14G2-like family protein