PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_002099
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 243aa    MW: 26933.4 Da    PI: 9.9409
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_002099genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.11.6e-122564746
                 HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                  rr+++NReAAr+sR+RKka++++Le    +L++  ++L+
  DCAR_002099 25 LRRLAQNREAARKSRLRKKAYVQQLESSRMQLTQLEQDLQ 64
                 59*************************9999999888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-91867No hitNo description
SMARTSM003383.4E-81982IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-72368No hitNo description
PROSITE profilePS502178.7492665IPR004827Basic-leucine zipper domain
PROSITE patternPS0003602641IPR004827Basic-leucine zipper domain
PfamPF001703.3E-92665IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MMASASPRTD TSADGDIDDK TPATLRRLAQ NREAARKSRL RKKAYVQQLE SSRMQLTQLE  60
QDLQRARQQG KYISSTGDQS QSLSGNGALA FDAEYARWLE DHTRRANELR GALLMVKLEP  120
LTEHQMIAIT NLQQSAQQAE DALSQGMEAL QQSLADTLAG SLAQSNSAGN VASYMGQMAM  180
AMGKLGTLEN FICQADNLRK QTFQQLHRIL TTRQSARAVI AINDYFSRLR ALSSLWLARP  240
RE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011467320.11e-116PREDICTED: transcription factor TGA2-like isoform X5
RefseqXP_011467321.11e-116PREDICTED: transcription factor TGA2-like isoform X6
SwissprotQ0JNL31e-103TGA23_ORYSJ; Transcription factor TGA2.3
TrEMBLA0A162B3731e-174A0A162B373_DAUCS; Uncharacterized protein
STRINGSb03g037560.11e-107(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1645924
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-47bZIP family protein
Publications ? help Back to Top
  1. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]