PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_002023
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 163aa    MW: 19203.4 Da    PI: 5.7159
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_002023genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.21.2e-1585143563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  +++rr+++NRe+ArrsR RK+++++eL   v  L +eN+ L+++l++ +++ ++  +e+
  DCAR_002023  85 RKQRRMISNRESARRSRMRKQKQLDELWSQVVWLRNENQHLIDKLNKFSEQHEQALQEN 143
                  689************************************************99999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-1281145IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.77283146IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-1285158No hitNo description
PfamPF001701.1E-1385143IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.34E-1285135No hitNo description
CDDcd147025.87E-1886136No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MQTSEMAELH YLVPPDPITV LPSQFSYSQN NTPTFDQFSR FSNPLLYDLQ INPQLQNFNP  60
QPTSFSSNST SDEADEKQLC LINERKQRRM ISNRESARRS RMRKQKQLDE LWSQVVWLRN  120
ENQHLIDKLN KFSEQHEQAL QENAQLKDET SQLRQMLSDM QL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197104RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017226161.11e-115PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC22e-38BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A166GUM81e-113A0A166GUM8_DAUCS; Uncharacterized protein
STRINGVIT_14s0083g00700.t017e-67(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-45basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]