PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_000914
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 254aa    MW: 26801.9 Da    PI: 6.0457
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_000914genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP95.88.3e-301112244115
          TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.....kaaksaak 96 
                  +  + ++ hTkv+g +RR R++ +caar+F+L++eLG+ +d++ti+WLlqqa+pai+ +tgt++ +a+++ +++    +   ++g     +  k++  
  DCAR_000914 111 QPAPRKDLHTKVEGGGRRTRIPTLCAARIFQLTKELGLATDGETIQWLLQQAEPAIIRATGTGTVPANATVTADGTLGVPDTNKGaaedvS--KTSGL 206
                  56788*********************************************************99999888444444444433333334321..11112 PP

          TCP  97 skksqksaasalnlakesr 115
                     ++++ + ++n    s 
  DCAR_000914 207 APGAPSPVS-NQNQTSVSC 224
                  222222222.122222222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136921.357115169IPR017887Transcription factor TCP subgroup
PfamPF036341.8E-23115184IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MTYSSSSELP RVPGEEHKGA GESEGPLHWL LEHAEESITR AYGGSTKITE TDKEAELVHD  60
DGGSKTRGQA TVGPRPVFIP GRRYWIVPQG GGPQQVSPVS IYGSYPCEPS QPAPRKDLHT  120
KVEGGGRRTR IPTLCAARIF QLTKELGLAT DGETIQWLLQ QAEPAIIRAT GTGTVPANAT  180
VTADGTLGVP DTNKGAAEDV SKTSGLAPGA PSPVSNQNQT SVSCEARVSS AAEEEYDEVV  240
LMGKKIRFRK GGI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245466.12e-81PREDICTED: transcription factor TCP9-like
TrEMBLA0A166FZH70.0A0A166FZH7_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.12e-31TCP family protein