PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_000913
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 192aa    MW: 20249.9 Da    PI: 5.838
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_000913genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP100.92.3e-3128136589
          TCP   5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg............ 88 
                    + ++ hTkv+gR+ R+R++ +ca r+F+L++eLG+ +d++ti+WLlqqa+pai+ +tgt++ +a ++     + s  + + ++g            
  DCAR_000913  28 PAPRKDLHTKVEGRGSRIRMPTLCATRVFQLTKELGLATDGETIQWLLQQAEPAIIRATGTGTVPAIATvtA--DGSLRVPETKEGaaedvsktsgla 123
                  56789********************************************************99999666332..333333322222223333334444 PP

          TCP  89 ............k 89 
                               
  DCAR_000913 124 pvgpspvsvpgfG 136
                  4555555555540 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036348.6E-2531101IPR005333Transcription factor, TCP
PROSITE profilePS5136921.7753185IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MTECMYQNMS SQKDFKGDSQ VSGGPSQPAP RKDLHTKVEG RGSRIRMPTL CATRVFQLTK  60
ELGLATDGET IQWLLQQAEP AIIRATGTGT VPAIATVTAD GSLRVPETKE GAAEDVSKTS  120
GLAPVGPSPV SVPGFGMAAE NGMRMGVPHG AEPNQNQTSV SCEARVSSDA EEEYDEVVLM  180
GKKIRFRKGG I*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245466.11e-139PREDICTED: transcription factor TCP9-like
SwissprotO646471e-32TCP9_ARATH; Transcription factor TCP9
TrEMBLA0A166FZF01e-138A0A166FZF0_DAUCS; Uncharacterized protein
STRINGBo4g024860.13e-32(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.29e-34TCP family protein