PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_000912
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 143aa    MW: 14939 Da    PI: 9.6811
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_000912genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP43.71e-133561766
          TCP 17 gRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....s 66
                 gR++ + +sa+caa + +L++ LGf++  +t++WLl  a+    + +++    +
  DCAR_000912  3 GRGKNIKMSASCAAHISQLTKDLGFKSEDETLQWLLDRAEGRGTATPSSnavgG 56
                 8**************************************988777777755441 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS513699.627148IPR017887Transcription factor TCP subgroup
PfamPF036341.3E-9453IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MQGRGKNIKM SASCAAHISQ LTKDLGFKSE DETLQWLLDR AEGRGTATPS SNAVGGASSE  60
TPKVPEKKKA EPVCQDIVPK TSGSAPVGPT PVFIPGKGFW MVPDDGGKPQ QVWPVPLALT  120
RGIGVKMQGP YAPGSSEQNQ KP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245446.11e-99PREDICTED: transcription factor TCP9-like
TrEMBLA0A162A1P42e-98A0A162A1P4_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.22e-12TCP family protein