PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_000904
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 154aa    MW: 15877 Da    PI: 8.8817
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_000904genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP92.96.4e-2920112589
          TCP   5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg........k 89 
                    +++ ++Tkv+gR+ R+R++ +ca r+F+L++eLG+ +d+ ti+WLl+qa+pai+ +tgt++ +a ++     + s  + + ++g        +
  DCAR_000904  20 PAPKKERYTKVEGRGSRIRIPTLCATRVFQLTKELGLATDGATIQWLLEQAEPAIIRATGTGTVPAIATvtA--DGSLRVPETKEGaaedvsktS 112
                  67899********************************************************99999666332..333333322222223333330 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.1E-222292IPR005333Transcription factor, TCP
PROSITE profilePS5136918.7092377IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MSSQKDFKGD SQVSGGPSQP APKKERYTKV EGRGSRIRIP TLCATRVFQL TKELGLATDG  60
ATIQWLLEQA EPAIIRATGT GTVPAIATVT ADGSLRVPET KEGAAEDVSK TSGLAAVGPS  120
PVSVPGYGMA AENGMKMNQN QASAGELCCR GRV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245378.11e-108PREDICTED: transcription factor PCF2-like
SwissprotQ9LT898e-31TCP19_ARATH; Transcription factor TCP19
TrEMBLA0A166FZ741e-106A0A166FZ74_DAUCS; Uncharacterized protein
STRINGBo4g024860.19e-31(Brassica oleracea)
STRINGXP_006401898.18e-31(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.23e-33TCP family protein