PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_000903
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 181aa    MW: 19002.4 Da    PI: 7.5193
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_000903genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP101.21.8e-3120130589
          TCP   5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg............ 88 
                    + ++ hTkv+gR+ R+R++ +ca r+F+L++eLG+ +d++ti+WLlqqa+pai+ +tgt++ +a ++     +    + + ++g            
  DCAR_000903  20 PAPRKDLHTKVEGRGSRIRMPTLCATRVFQLTKELGLATDGETIQWLLQQAEPAIIRATGTGTVPAIATvtA--DGTLRVPERKEGaaedvsktsgla 115
                  56789********************************************************88888555332..222222222222224444445556 PP

          TCP  89 ..............k 89 
                                +
  DCAR_000903 116 pvgpspvsvpgygmA 130
                  666666666665431 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136921.7752377IPR017887Transcription factor TCP subgroup
PfamPF036347.7E-252392IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MSSQKDFKGD SQVSGGPSQP APRKDLHTKV EGRGSRIRMP TLCATRVFQL TKELGLATDG  60
ETIQWLLQQA EPAIIRATGT GTVPAIATVT ADGTLRVPER KEGAAEDVSK TSGLAPVGPS  120
PVSVPGYGMA AENGMRMGGP HGAEPNQNQT SEARVSSDAE EEYDEVVLMG KKIRFRKGGI  180
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245466.11e-124PREDICTED: transcription factor TCP9-like
RefseqXP_017245482.11e-124PREDICTED: transcription factor TCP9-like
TrEMBLA0A166FZ301e-128A0A166FZ30_DAUCS; Uncharacterized protein
STRINGXP_009780060.16e-33(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.24e-34TCP family protein