PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_000635
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family WRKY
Protein Properties Length: 294aa    MW: 33475.1 Da    PI: 4.9174
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_000635genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.3e-29134192259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++prsYYrC+s+ gCp++++ve s +dp + +itY+ eHnh 
  DCAR_000635 134 SDLWAWRKYGQKPIKGSPYPRSYYRCSSSkGCPARRQVEESCSDPGMYIITYSAEHNHA 192
                  799************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-30122194IPR003657WRKY domain
PROSITE profilePS5081131.617128194IPR003657WRKY domain
SuperFamilySSF1182902.35E-25129194IPR003657WRKY domain
SMARTSM007741.1E-34133193IPR003657WRKY domain
PfamPF031068.3E-25135191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MEEDWGLQAI VRACSHDQCT TDSVLDQYNY RDDLFYDFPE FEELKNNDCS LIVDELDDRY  60
KPFFHDPTPT PISSFSSHLE NSDSQGCEVK LEQEVMLKVM EQHETAPVAK PKALTPAAKY  120
KRVVVQVTSD GLSSDLWAWR KYGQKPIKGS PYPRSYYRCS SSKGCPARRQ VEESCSDPGM  180
YIITYSAEHN HAQPTRRSSL AGTNRQKFST LKRTCSDESC VSSMHVDQVQ SLKKIKHEKK  240
DDTIDEQSRG QNLSGLDREF VIEDSILTEN FFEVLDDLDG LVSYSSLHGF YSQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-18122194274WRKY transcription factor 1
5w3x_B7e-18118195380Disease resistance protein RRS1
5w3x_D7e-18118195380Disease resistance protein RRS1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017218416.10.0PREDICTED: WRKY transcription factor 22
TrEMBLA0A161ZKY50.0A0A161ZKY5_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57812335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-33WRKY family protein