PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK17535.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family Trihelix
Protein Properties Length: 227aa    MW: 25783.7 Da    PI: 9.7069
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK17535.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.17e-1620110272
   trihelix   2 WtkqevlaLiearremeerlrrg.k...................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                Wt +e++ Liea++ ++er  ++ +                    ++ +W++v ++++++g+ rs++qC++kw+nl ++ykk+++ e+k +
  PK17535.1  20 WTVSETMILIEAKKMDDERRMKRiSgndneqarnsgsttptsnkPAELRWKWVEDYCWRKGCCRSQNQCNDKWDNLMRDYKKVRDYERKIA 110
                *************95555544321123445555566666676669999***************************************9974 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.3771296IPR017877Myb-like domain
PfamPF138375.4E-1219108No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MADQGTNTTT LIRDYRKGNW TVSETMILIE AKKMDDERRM KRISGNDNEQ ARNSGSTTPT  60
SNKPAELRWK WVEDYCWRKG CCRSQNQCND KWDNLMRDYK KVRDYERKIA GKSAASTVAG  120
GSGDQSYWKI EKNERKERNL PTNMLPQIYE ALVDVVEKKG QRVSGGISST GVPSISIPSS  180
SPSIGYQMVE RTMSSGVHHQ HHHHLQQTPL ISTSQAILMQ PHHISAX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024022806.14e-92uncharacterized protein LOC21408586
TrEMBLA0A2P5CN851e-105A0A2P5CN85_PARAD; Myb-like domain containing protein
STRINGXP_010098471.11e-91(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68043242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31310.14e-60Trihelix family protein