PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK14700.4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family HSF
Protein Properties Length: 271aa    MW: 31743.3 Da    PI: 4.7316
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK14700.4genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind41.44e-1324452103
                   HHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXXX CS
  HSF_DNA-bind  52 SFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkkse 103
                   SFvRQLn+YgF+k++ ++         weF+++ F +++k+ll++i+r++ +
     PK14700.4   2 SFVRQLNTYGFRKIDADR---------WEFANEGFIRDQKHLLKSIRRRRAS 44 
                   9**************999.........*********************9865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF004474.6E-10241IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467858.16E-11241IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.104.0E-12241IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004153.6E-4241IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
XSFVRQLNTY GFRKIDADRW EFANEGFIRD QKHLLKSIRR RRASSQPFPH EQQALGPCVE  60
VGRFGLDAEI DRLRRDKQVL MMELVKLRQQ QQNTRAYLQA MEQRLQGTEM KQQQMMAFLA  120
RAMKNPAFLQ QLLQQKERRK VIEEAMTKKR RRPIDQGPSS RSSGIETSHG SIKVEPLESS  180
DYGFEVSELE ALAFEMQGFG KLRMEQEEGD EELEPPESGD RELDDGFWEE LFSEDAKGVE  240
DEDVNVLTDH FGCLGSSPRE QEELREEDYW W
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12841RDQKHLLKSIRRRR
2137151RRKVIEEAMTKKRRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891435.11e-133PREDICTED: heat stress transcription factor A-7a-like
RefseqXP_015891434.11e-133PREDICTED: heat stress transcription factor A-7a-like
RefseqXP_015891386.11e-133PREDICTED: heat stress transcription factor A-7a-like
SwissprotQ6VBB21e-80HFA2B_ORYSJ; Heat stress transcription factor A-2b
SwissprotQ9LUH81e-80HFA6B_ARATH; Heat stress transcription factor A-6b
TrEMBLA0A061DQG31e-129A0A061DQG3_THECC; DNA binding protein, putative isoform 3
TrEMBLW9QXL81e-128W9QXL8_9R
STRINGPOPTR_0005s23640.11e-120(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF110034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.15e-73heat shock transcription factor A6B