PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK04169.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family TCP
Protein Properties Length: 372aa    MW: 38037 Da    PI: 9.1478
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK04169.3genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP133.61.8e-4196197289
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............ 88 
                a+ k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++  + s +ss+s+ s++            
  PK04169.3  96 APVKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSsLNISLRSSGSTLSAPhsksaphsfhsa 195
                7789*****************************************************************9997777777777744444222223333333 PP

        TCP  89 .k 89 
                 +
  PK04169.3 196 lA 197
                30 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.0E-40101224IPR005333Transcription factor, TCP
PROSITE profilePS5136928.496102156IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001047Molecular Functioncore promoter binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
XSSSSHHQFV VPFDGRSSSN SPFMGSISIQ AGLSHSHGHT NSSTTTTTTT TTSSLSTSSS  60
SSSSTTTTVD ASLAIATRSE SLPLKNQLVV APAAPAPVKR STKDRHTKVD GRGRRIRMPA  120
TCAARVFQLT RELGHKSDGE TIEWLLQQAE PAIIAATGTG TIPANFSSLN ISLRSSGSTL  180
SAPHSKSAPH SFHSALALAA HHYDDGGGFA HSGLMGFHHH QQQHHHQQPS PPVPLMTADQ  240
IAEALPGGGD SGGGGGGDSS ENYMRKRFRE DLFKENSDST TNQGGGGGGG SPSSNSNKSF  300
KSGDGGGGGD SGGGLQLPKQ QQNQDGSGSS GLLRPSNILP ATAMWAVAPA QASGAGSTFW  360
MLPVSAGAGV SX
Functional Description ? help Back to Top
Source Description
UniProtCan specifically bind site II elements in the promoter region of PP438/PNM1. {ECO:0000269|PubMed:21297037}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018835543.11e-126PREDICTED: transcription factor TCP8-like
SwissprotQ9C5187e-69TCP8_ARATH; Transcription factor TCP8
TrEMBLA0A2P5BJ321e-134A0A2P5BJ32_PARAD; TCP transcription factor
STRINGEOX971601e-121(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60773050
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.12e-52TCP family protein
Publications ? help Back to Top
  1. Mazur MJ, et al.
    Arabidopsis TCP Transcription Factors Interact with the SUMO Conjugating Machinery in Nuclear Foci.
    Front Plant Sci, 2017. 8: p. 2043
    [PMID:29250092]