PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_8794_iso_5
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family BES1
Protein Properties Length: 691aa    MW: 78939.1 Da    PI: 6.3522
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_8794_iso_5genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8221586.5e-49862282134
                               DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskp 75 
                                          ++ rk+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGwvve+DGttyr++   
  cra_locus_8794_iso_5_len_2294_ver_3  86 SKSRKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQSLPV 159
                                          678*******************************************************************9877 PP

                               DUF822  76 l..eeaeaagssasaspesslq.sslkssalaspvesysaspksssfpspssldsislasa.......a 134
                                          +  ++++  g+    s+es+l+ sslk++++++ v+ + ++++ ++++sp+slds+ +a+        +
  cra_locus_8794_iso_5_len_2294_ver_3 160 NhvNNSHNLGQCPVSSVESPLSvSSLKNCSVKTSVDCQPSVLRIDESLSPASLDSVIAAERdikvdkyT 228
                                          77799999**************9********************************98876655554443 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.8E-4986233IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514451.44E-158257689IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.7E-171260689IPR013781Glycoside hydrolase, catalytic domain
PfamPF013735.7E-84283653IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-58297311IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-58318336IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-58340361IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-58433455IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-58506525IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-58540556IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-58557568IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-58575598IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-58613635IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    Send to blast
XLFEEQAKLA KXKEEYAAEM NNTTSTTTAR NHPHHQDLDP HDPNLTPTPY PQPHPQQSQT  60
RRPRGFAATM ATTTTSSSTS PANTNSKSRK EREKEKERTK LRERHRRAIT SRMLAGLRQY  120
GNFPLPARAD MNDVLAALAR EAGWVVEADG TTYRQSLPVN HVNNSHNLGQ CPVSSVESPL  180
SVSSLKNCSV KTSVDCQPSV LRIDESLSPA SLDSVIAAER DIKVDKYTSI SPIRSPECLQ  240
ADQLIREVQT AEHGNDFSGT QYVPVYVMLA TGLVDSFCKL LNPEGVRQEL RHLKSLHVDG  300
VVVDCWWGIV EGWTPQKYEW SGYRELFNII REFEMKLQVV IAFHEYGGND SGGVFISLPQ  360
WVLEIGKENQ DIFFTDREGR RNTECLSWSI DKERVLRGRT GIEVYFDFMR SFRTEFDDFF  420
REGLISAVEI GLGPFGELKY PSFSERMGWR YPGIGEFQCY DRYSLQNLRK AATSRGHSFW  480
ARTPDNAGYY TSRPHETGFF CERGDYDSYY GRFFLRWYSQ VLIDHADNVL SLASLAFEEI  540
QLVVKIPAVY WWYKTTSHAA ELTSGYYNPT NQDGYSQIFE VLKRHLVVMK FVCPGMQLPC  600
HEIDDASADP EALSWQVLNS AWDKGLAVAG QNAVPSYERE GLMRLVDVSK PRNDPDRHQF  660
SFFVFQQPSD LVQRSMCFSE LDYFIKQMHG I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wdq_A1e-12626169010443Beta-amylase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00543DAPTransfer from AT5G45300Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002270680.10.0PREDICTED: beta-amylase 8
SwissprotQ9FH800.0BAM8_ARATH; Beta-amylase 8
TrEMBLA0A0K0PUA90.0A0A0K0PUA9_CAMSI; Beta-amylase
STRINGSolyc08g005780.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16072448