PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_6959_iso_6
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family G2-like
Protein Properties Length: 50aa    MW: 5553.14 Da    PI: 7.3616
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_6959_iso_6genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like44.14.7e-142246125
                              G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                                         k+rlrWt+eLHerFv+av+qLGG++
  cra_locus_6959_iso_6_len_1392_ver_3 22 KQRLRWTNELHERFVDAVAQLGGPD 46
                                         79*********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.0E-122147IPR009057Homeodomain-like
SuperFamilySSF466899.68E-62146IPR009057Homeodomain-like
TIGRFAMsTIGR015577.5E-102247IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 50 aa     Download sequence    Send to blast
MDFMGGGNNN MNNSNNSNLA SKQRLRWTNE LHERFVDAVA QLGGPDSKCL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554068.17e-17uncharacterized protein LOC105175200
TrEMBLM1ABL62e-17M1ABL6_SOLTU; Uncharacterized protein
STRINGXP_008351138.15e-15(Malus domestica)
STRINGXP_010059710.17e-15(Eucalyptus grandis)