PlantTFDB
Plant Transcription Factor Database
PlantRegMap/PlantTFDB v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_57229_iso_1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family bZIP
Protein Properties Length: 128aa    MW: 14651.8 Da    PI: 10.5495
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_57229_iso_1genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.34.6e-202486163
                                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                               bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                                         e+elkr+rrkq+NRe+ArrsR+RK+ae++  ++++++L++eN +L+ el++l+ e ++l +++
  cra_locus_57229_iso_1_len_509_ver_3 24 ERELKRQRRKQSNRESARRSRLRKQAECDDMAQRAEVLKEENASLRAELSRLRSEHDQLAAQN 86
                                         89********************************************************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-181785No hitNo description
PfamPF001701.6E-182486IPR004827Basic-leucine zipper domain
SMARTSM003382.3E-202488IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.9672689IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-112783No hitNo description
CDDcd147021.09E-132980No hitNo description
PROSITE patternPS0003603146IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
XVAGGLVTAR SRDSVQSQMW IQDERELKRQ RRKQSNRESA RRSRLRKQAE CDDMAQRAEV  60
LKEENASLRA ELSRLRSEHD QLAAQNASLR ERLGEVPGRD DPRPSRNDIS LNKDTQHSSQ  120
TEPTQGGQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14046RRSRLRK
24047RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016508279.14e-77PREDICTED: bZIP transcription factor 16-like
RefseqXP_016508280.14e-77PREDICTED: bZIP transcription factor 16-like
SwissprotQ501B25e-35BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2G2XM924e-77A0A2G2XM92_CAPBA; Uncharacterized protein
STRINGSolyc08g076100.2.13e-75(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30652446
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]