PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_3317_iso_1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family G2-like
Protein Properties Length: 291aa    MW: 33415.9 Da    PI: 10.4774
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_3317_iso_1genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like47.25e-1529572755
                              G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                                         AtPk +l+lm+v gL+++hvkSHLQ+YR+
  cra_locus_3317_iso_1_len_1051_ver_3 29 ATPKLVLQLMNVRGLSIAHVKSHLQMYRS 57
                                         9***************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-132858IPR009057Homeodomain-like
TIGRFAMsTIGR015576.2E-102958IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
NXKAWWPRKQ LSVEDVDPXX XCEWVLAGAT PKLVLQLMNV RGLSIAHVKS HLQMYRSKRL  60
DESGQVLGRA NRGVFQAGKG YNIPDKMGNP LLLQHNLRFH NLITSHHHSL HQSPYYIRSL  120
SSRYQQWHPY GKDTTIKARA LMSMDNNQHG NNRSWVNYGM HGAGSTRNIN GPIRPSRLHE  180
EKRWPPPRER IMISKLENAP AVSRPCSNQL GNNSVGTNYL KQRYNNYWKC SSSRDSCFKP  240
SNFIPNHLLQ QKNDDKVLDG KDWRLPDDLQ LSLRPSTKGD SDVNTMLSLS L
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027105537.13e-46transcription factor HHO1-like
TrEMBLA0A068TN771e-44A0A068TN77_COFCA; Uncharacterized protein