PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_2599_iso_1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family Dof
Protein Properties Length: 300aa    MW: 32128.5 Da    PI: 6.7446
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_2599_iso_1genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof43.37.6e-142263862
                              zf-Dof 38 ryWtkGGalrnvPvGggrrknkkss 62
                                        ryWtkGGalrnvP+Ggg+rknkk++
  cra_locus_2599_iso_1_len_899_ver_3  2 RYWTKGGALRNVPIGGGCRKNKKMK 26
                                        9*********************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-5220IPR003851Zinc finger, Dof-type
PfamPF027012.9E-8224IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
XRYWTKGGAL RNVPIGGGCR KNKKMKSSSS SRLSGGGGDS KDSSTSSDIS GLKFFHGLTP  60
AMDFQIGGIN FPRLHHDSSS AVAATAGGHV YNQFSSYGDI SSNTSPAIVS TPAGFNLDPS  120
LNSNPLMGFN FPFSSGFNGG INQEMGSVNG NTSLASSIES LSSINQDLHW KLQQQRLAML  180
YGGENHQQKE TDNTIPPQTS FSSLDHHHHQ NQIQKPQPMF FHNLEISSSK AEEANGVDDN  240
SRKEGESGTG NLATEDFGNS YGPVTPTPTN STGNGNENIS SWNGMLSWGN LNQYSPLPXR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007047735.15e-95PREDICTED: dof zinc finger protein DOF5.7 isoform X1
RefseqXP_021274371.14e-95dof zinc finger protein DOF5.7-like
TrEMBLA0A061DI281e-93A0A061DI28_THECC; Dof-type zinc finger DNA-binding family protein
STRINGEOX918922e-94(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52422234