PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_17603_iso_1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family BES1
Protein Properties Length: 296aa    MW: 32598.4 Da    PI: 4.9401
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_17603_iso_1genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82235.24.5e-116413368134
                                DUF822  68 tyrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa....a 134
                                              +g++p+   e++g+s++++p+ss + s+ ss++asp++sy++sp sss psp++ d ++++++     
  cra_locus_17603_iso_1_len_1310_ver_3  64 NMIQGCRPP-PIEMGGTSTNITPSSSRNPSPPSSYFASPIPSYQPSPLSSSCPSPTRHDANPASHPfaflR 133
                                           55689***9.99*************************************************9986654442 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.7E-767123IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009742Biological Processbrassinosteroid mediated signaling pathway
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
KQWLLXXFLE ISGCEAQFCS DNCVFNERIL LFAFALYFNI ELFLEFLRNL VYEDDVLKRN  60
FGLNMIQGCR PPPIEMGGTS TNITPSSSRN PSPPSSYFAS PIPSYQPSPL SSSCPSPTRH  120
DANPASHPFA FLRNVIPSTL PPLRISNSAP VTPPLSSPTR LPMQTFNLEA LAKESMSALN  180
IPFFAASAPA SPTRAQRFTP ATIPECDESD SSTIDSGQWM NFQTYTTNTV PTSPTFNLMK  240
PMVHQQAPSG NAVMDKGKGT EFDFEKLTVK AWEGERIHEV GLDDLELTLG SGNGRI
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00237DAPTransfer from AT1G75080Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009767052.11e-118PREDICTED: protein BRASSINAZOLE-RESISTANT 1-like
SwissprotQ8S3071e-75BZR1_ARATH; Protein BRASSINAZOLE-RESISTANT 1
TrEMBLA0A068UH771e-118A0A068UH77_COFCA; Uncharacterized protein
STRINGSolyc04g079980.2.11e-108(Solanum lycopersicum)
STRINGPGSC0003DMT4000715851e-109(Solanum tuberosum)