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Plant Transcription
Factor Database
v4.0
Previous version: v1.0,
v2.0,
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_1511_iso_3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | EIL | ||||||||
Protein Properties | Length: 426aa MW: 48335.5 Da PI: 5.7974 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 480.5 | 1e-146 | 42 | 337 | 1 | 299 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvY 74 +el++rmw+d+m+lkrlke++k ke ++a+k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvY cra_locus_1511_iso_3_len_1881_ver_3 42 DELERRMWRDKMRLKRLKEMNKG----KEG-IDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVY 110 79*******************98....788.******************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHH CS EIN3 75 giipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLL 148 giipekgkpv+gasd+Lr+WWk+kv+fdrngpaai+ky a+n i+++ ++ + ++h+l+elqDTtlgSLL cra_locus_1511_iso_3_len_1881_ver_3 111 GIIPEKGKPVSGASDNLREWWKDKVRFDRNGPAAIAKYLADNSIPGKTEGTNP-VGPTPHTLQELQDTTLGSLL 183 ***********************************************999977.99****************** PP HHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHH CS EIN3 149 salmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptie 222 salmqhcdppqrrfplekgv+pPWWPtG+e+ww++lgl+kdqg+ppykkphdlkkawkv+vLtavikhmsp+i+ cra_locus_1511_iso_3_len_1881_ver_3 184 SALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQLGLQKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIA 257 ************************************************************************** PP HHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.XXXXXXXXXXXXXXXXXXXX.XXXXXX. CS EIN3 223 eirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.slrkqspkvtlsceqkedve.gkkeski 292 +ir+l+rqsk+lqdkm+akes+++l+++nqee ++++++++ ++ s++ +s ++ +++ +++dve ++++++ cra_locus_1511_iso_3_len_1881_ver_3 258 KIRKLVRQSKCLQDKMTAKESATWLAIINQEEVLARELYPDrcPPlSSSGGSGSFAINDTSEYDVEgVEDDPNF 331 *****************************************864456677****************65666664 PP XXXXXXX CS EIN3 293 khvqavk 299 k cra_locus_1511_iso_3_len_1881_ver_3 332 DXP-RAK 337 433.333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 6.0E-131 | 42 | 289 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.4E-76 | 163 | 299 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 9.55E-63 | 168 | 292 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001666 | Biological Process | response to hypoxia | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence Send to blast |
MGFCGDLDFF SAPLKEPDVE APNNEQEPVV DDDYSDDEID VDELERRMWR DKMRLKRLKE 60 MNKGKEGIDA AKQRQSQEQA RRKKMSRAQD GILKYMLKMM EVCKAQGFVY GIIPEKGKPV 120 SGASDNLREW WKDKVRFDRN GPAAIAKYLA DNSIPGKTEG TNPVGPTPHT LQELQDTTLG 180 SLLSALMQHC DPPQRRFPLE KGVPPPWWPT GNEEWWPQLG LQKDQGPPPY KKPHDLKKAW 240 KVGVLTAVIK HMSPDIAKIR KLVRQSKCLQ DKMTAKESAT WLAIINQEEV LARELYPDRC 300 PPLSSSGGSG SFAINDTSEY DVEGVEDDPN FDXPRAKLAH GRAMFQPGDR YEDGTMQPTN 360 RSMFHQGDRF DQCKMLNSPF NTNGNETFQF MFGSPFNIPS VDFSEGLPGV SRDNIVPKQD 420 IPIWYP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 3e-85 | 167 | 298 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 3e-85 | 167 | 298 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00367 | DAP | Transfer from AT3G20770 | Download |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009801714.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_016491027.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A068VEZ0 | 0.0 | A0A068VEZ0_COFCA; Uncharacterized protein | ||||
STRING | GLYMA20G12250.1 | 0.0 | (Glycine max) |