PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre16.g692250.t1.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bZIP
Protein Properties Length: 1526aa    MW: 153085 Da    PI: 5.1682
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre16.g692250.t1.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1475.6e-159871047363
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1    3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63  
                          +++rerrk++NRe+Arr+R+R++ae +eL +k  +L + N++L+ ++e+++ ++ ++++++
  Cre16.g692250.t1.1  987 ADRRERRKESNRESARRCRLRREAEGAELGKKTNVLAGTNDMLRAQVEQMEATANRMEDQN 1047
                          799**************************************************99999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.4E-109851046No hitNo description
SMARTSM003386.1E-149851049IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.5539871050IPR004827Basic-leucine zipper domain
PfamPF001703.5E-139871047IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.98E-89891044No hitNo description
CDDcd147021.41E-139901037No hitNo description
PROSITE patternPS0003609921007IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1526 aa     Download sequence    Send to blast
MQASLSETLG PGAAYLQPRP AGPGPPYGSA YMTGLPEAAG AAAQYLPMAA LGTARPNFYG  60
LDPAAAAAAA AAAAANAAGQ AQGGFLPYPV PPAGFSSPFT TGTTAPVLTT VPSSLVTATS  120
NAAVEVQPLI SSPGQGPYGM WAGNDLASDR SETGYAAPTA GYPPGYLQQL QLQQYQQQPQ  180
QQQQQQQQVP DAGAAAAAYG GAGAPVPGYP QAMGGSPATN PADYWRQLAA AALGGGAAHS  240
TPGQAPGDLQ ALYLQQLQQQ QQQQQLQQQQ QQQQAAAAAL QFAYLQQQQQ QQLQQQLQAC  300
GMQGLLRLPG AGVPGAPPGL PLDPSQGPAA QLQHLLMLQQ VQQAQQQQQQ QQQQQQQQQQ  360
QQQQQQQQQA QAPGAPFGMM GSLSDPALAA AVATALQLLQ LPANLRALAA ANMPPNAIQQ  420
QQQLQQFHQQ QQQQLVQQQQ LQQLQLQLAG YPPGAAPGYG AASGLLALIP QLQGQAAYAA  480
GMDPAAIAAA AAAAGAAAAA QQQQQQLQQQ PGPGLAMQQQ QQFQQQQQQD YAGFGLMSPV  540
EPQSGAQPGS GGPALPDSPQ LHGGYSGDYG GLFAAEDMEG GVDTRTSEEA RMEAAAAVGG  600
NDGPGLQQQQ QQQQLGPLSA QMQEEQASEQ QPQLPQLPVL PSATEQYQGG QGQDLVRPHS  660
RPPSDQGMAQ PPAPQSNPPP LQQPIRPVPA IPLAIPHATG TGPPGHFQQP AFMSALLATS  720
SNPNLGFAGP NTPAGSTPPA LPDAATAAVD GGRAGGGPGS PQRSASPSQS MSQTDTEEED  780
DDDDEDTSAS PSPSPAVSPR ASPDRCSQQL QAQLQAQLQQ QLQQQQQQLL QSQPSMDMGG  840
QGSMTGMGGL TPAAALLFLG LQQQQQQRQL QAQQQQHHSV AVAAAAAAAA AAAAAEQSSG  900
CMHPLAAAAL QQFQDASSLS SAAHLSSLAP AYAPSSAAAV AHHTLSAAAT GAAAPLRPAS  960
VATTGRGGGG GGGGGTSRTT SRKRTAADRR ERRKESNRES ARRCRLRREA EGAELGKKTN  1020
VLAGTNDMLR AQVEQMEATA NRMEDQNVIL SQWLQHIESA GDDAPAAAAT ILECIRQQDA  1080
AQIAAAAVQQ MQAAIQGQAA AALDAGGWDG AAAGKDQMAG DPGSLDGETE PDTDDDDGAA  1140
GDAAAARRPA GQASPQGAGT PGSGRAKGGG AKGGGARRQQ PKPKSKKEPA ADGGDAVQDG  1200
TQSAGPARAA AGRGAGAGKT AKRKKPSDGG AMQGTPTGAA AEAGRPEAAA GGEDANAAAQ  1260
LIAGSEGERG RSTQRQRQEP PQQRPGGGTA TDGACTSAAA GASGHPSQAV RSASGAATAG  1320
GAKRKRAQAG ADDGSGSPQR SGAQEHAGAR VAAGGAGRTR PRSGGSGASG GNSRGNGYTN  1380
GGRGRSPVAG GSNTGLTTAS AAASEDWAML QEDLRTPELG QQTGEDVTNA GAAVAAGPSA  1440
RAGGRRGAAS LASPQPLPPG VLGSGLTLAC PSPSVDMMLM AAAADRSLGG LAGEDSRCGS  1500
LEGSGGMGGA GGSGGCGSGG SSRRL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1750756GGRAGGG
2963975TGRGGGGGGGGGT
310011008RRCRLRRE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00173DAPTransfer from AT1G32150Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre16.g692250.t1.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7001767
ChlorophytaeOGCP1447822