PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre13.g590350.t1.2
Common NameCHLREDRAFT_147286
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bZIP
Protein Properties Length: 335aa    MW: 34514.9 Da    PI: 4.6624
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre13.g590350.t1.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.21e-09118172260
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                         ++++ er    NR+A++r+RqRKk++++ L+  v++L+ + +    +++ l+ ++++l+
  Cre13.g590350.t1.2 118 RRIRTERQQVLNRLAQQRYRQRKKEKVQALQHNVDALQMQLE----RVSFLESQCDSLR 172
                         56788999999**************************99985....6677777777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001703.7E-7118173IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.41E-6122178No hitNo description
Gene3DG3DSA:1.20.5.1702.1E-6122172No hitNo description
CDDcd146878.50E-8129178No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MELGLAESLG DADSLAAYLN GSFIGGGSLE QTLEAPSFLG ELAAITGSME APYAAAAPEL  60
PAELKPEELP STSGAGFLPQ SEAGPMSEAG LSADGGLMSE DDAEGGATSC KGGGKRRRRI  120
RTERQQVLNR LAQQRYRQRK KEKVQALQHN VDALQMQLER VSFLESQCDS LRGTVAQLGA  180
DLAAKDAGLA AAQAQLRQAA VLLKGAQDKC ASQERQLAEQ AQALEAQRSQ LRVSNLASLD  240
PQALSDRLLA LVKEAFAAAA AERSSEIDGS GMAAPAAAAA APSAPPPLAM SEEVVAALSR  300
SLTSCCRELV FASKGLGGKQ AAAEAPSVIP VQCC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114119KRRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre13.g590350.t1.2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001693067.10.0predicted protein, partial
TrEMBLA8IW620.0A8IW62_CHLRE; Predicted protein (Fragment)
STRINGEDP036360.0(Chlamydomonas reinhardtii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1039644
Publications ? help Back to Top
  1. Merchant SS, et al.
    The Chlamydomonas genome reveals the evolution of key animal and plant functions.
    Science, 2007. 318(5848): p. 245-50
    [PMID:17932292]