PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre12.g557300.t1.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bZIP
Protein Properties Length: 1527aa    MW: 154908 Da    PI: 9.6768
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre12.g557300.t1.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.38e-0911611208249
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1    2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49  
                          ++l  e r+ +NReAA +sR+R+ ++++ Le+ + +L++   aL+  l
  Cre12.g557300.t1.1 1161 RALTQEERMLRNREAAAKSRARRHQYQQSLEQHILALQTHSAALRRLL 1208
                          578899********************************9999999655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.88711621210IPR004827Basic-leucine zipper domain
CDDcd147079.49E-1611641218No hitNo description
SuperFamilySSF579594.82E-611651208No hitNo description
PfamPF077164.4E-611661210IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-811661209No hitNo description
PROSITE patternPS00036011681182IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1527 aa     Download sequence    Send to blast
MDDVAAGRTA GRSADADEQK PTLGTAGIGP AVRGVSGPGM NPMETGMLRR PSEVAGRDPG  60
QARRPSEDDS WNPETLRTAS LLSHGRTYDM SKRESCTDSS TGAEFLLAGS YGLPPGGRRI  120
TSTTASHAAV GVPGGNAGGG QNSMLGPGQS FASGGAGRLG SFTSGSSQLG LRPPPLSIPS  180
PSGLAGQVPL LSHQHQQHSS QGPAGEGMHS TAPSTHQSGA RSRQLHSFGA PSTSGILPER  240
WSAGEGASGA GRGDAQPPQP GQMGLPPLPS RAMRGGPGHA ATTLSGGVGQ SAEAGEQRHG  300
LTPQLTGPGL GQGAGEMLGS AVVTTGAPGR APTPPQGGGG QAGAAAAGEL REDQLLSTTR  360
LGAPQLFGPG QGDNEARMPP ISAMLGLPGG PVADDDDRHA PASAFLEFAN EPGFASGPSG  420
RGAGGAPPSP THLVMAAMQA GQQFRSASLS SLSMQQMAAT PGAGQHGVAG LLGQRQGTVD  480
GPLGRPQSLN LPGTGGYEAV NLPGPGYAAA AAMAAAGAGD GGGYGGHALG SRSSPRHASQ  540
QSPRLFHQFQ QSGQMPSHFM QQQQQQQQQQ QQQQQQQLQA QQQLMYGQQQ QQGLDSPRMQ  600
MAPGPAMQAG QQQVLQQQQQ QHQAPSPYDD RQGVRPASPY GMDLQQQQQF LASQAAMREL  660
AMGAMRSQQL IPGLTRIASG VGAGSGGGGA GGGSYRTTLD GHSGQPGMHA QQQHHAASMA  720
QHQQQQQQQQ HTGSLAQAQY QQAMQRAGSH PHTLLSAQHQ QQQQHQQHQQ HQQQQQHQQQ  780
QQQQQHQQQQ LHQQQLAQRL DMLEQQQLEQ QRAASLSGVG LLSQGRAHPS PFHLQVNTGL  840
SGMDTAVYQS AGALDSPLAH RQHSLQLQQR QQSDMYSQQQ MLAQQGEASG FAGHQRGPSS  900
PGVNPWLFQQ QQQQQQQQLQ QQLSQPEPLG GALASGVVGD VGLGGERDAA AAAQARASRQ  960
LKRRRTSPHP SIARSASGGG VSGLEQGGGV QVPSSGPAPS SQPSGLRALV RDSGSVRRRQ  1020
NSASGGTGSG PTASAGAGQA TASAGGGLTL ADAAGSGQLG SGAPAATTVP TRALYMSDDE  1080
DAEFLSQGES QEESSSQGTP GEEREGGRTR RGGGRQGGTA SGRGGGGSLL MPLGDVSDGG  1140
FTGGGGSMVE IDPVTGQMRR RALTQEERML RNREAAAKSR ARRHQYQQSL EQHILALQTH  1200
SAALRRLLEQ NGISLPAPLR EQQAALGDGL PPPPRRNSPP RSRKGIGGRP RKYPLNPDGS  1260
KPTRSRRRTS TGTALTTAGW EGGAAEQAEG GEEAAGGGVS EGAGGTAGGS GGGARGGRGA  1320
GRGRRGAGSR GGKSAARGGR GRGRSSGGTR RDEEEGDDGE EGHGGSGQEE ELPGARGAAS  1380
GLLGQSSDPP NTSGTGAGGS VVIAGAVQEP RLSVSALTGL AKTQVQAGAA RGGGIAPAWS  1440
QPQPLGADGA AGGSGLAGAS LSAPLPGAGG GLLAPGGGGQ QGVHGGAGGA EAAEGAAAGQ  1500
QHQDHFDMLA IGSYSDLMTT LFSEGQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
111051113GGRTRRGGG
213141322RGGRGAGRG
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre12.g557300.t1.1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1437122