PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre12.g489000.t1.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bZIP
Protein Properties Length: 981aa    MW: 97079.6 Da    PI: 6.8382
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre12.g489000.t1.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.81.3e-0942103162
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                         e++ +r rr+  NR +A+rsR ++++e+  Le+ ++eL++e ++L+ el +++    +l+se
  Cre12.g489000.t1.1  42 EEDERRKRRLLANRKSAQRSRVKRLEEVGVLETLCEELSKEVDELRTELTTWRARQRELRSE 103
                         577899**********************************************9888888775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.7E-939102No hitNo description
SMARTSM003382.5E-842106IPR004827Basic-leucine zipper domain
PfamPF001708.6E-743103IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.66844107IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.94E-646101No hitNo description
CDDcd147038.42E-124798No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
Gene3DG3DSA:2.60.120.103.5E-4449480IPR014710RmlC-like jelly roll fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 981 aa     Download sequence    Send to blast
MARGKRKDAS GSNEDEHHPA GRKPGRTSAK KQKGLEDHGT SEEDERRKRR LLANRKSAQR  60
SRVKRLEEVG VLETLCEELS KEVDELRTEL TTWRARQREL RSEHGKFVSR LALHGVQVDE  120
EPVPEVLAVP DVVLPPRPRK AAVDDEGEEE SGDADSVGDD AELLGDGSEP AGADEDVKMV  180
TEAGAEGDGD GGGVDLDMVA AGTLGVKAET PSRTHTAVAP SPQPVQHPPS SQPHGQQPGG  240
PAAQPAQAQP QAHNGASGQL QRQPLQDAQQ RRNSGGSAGA GAGAAAGAGG ASCAAIGARH  300
AAQGAAYGAA ASGVAGVLLE PCSVRGAAGS HHVGQLTTFG SSSAAGAGPT AAALYASGSG  360
GYGLSPAEPL AASPLSGSAL AAAASGPSQA SAAAMAGTGA APTPPGYSTG EGSGGSSVAQ  420
PMLGRQAGVL MYPEPPSYYC CPGVQQAPLG PQQQQQQQQQ QQQQQQQQQQ QQSHHQAQHQ  480
PPPPPPQKLT PHQSLGGHHH PHRGPQLAPR PSGHHQPTHA SQQLRHHNSQ PLPLKSGGNS  540
ADLQGFASFP ACAVSGYSGG SGLHRGRSGI AAAAALAAAT ALASGRIGPA ELKRVASIPS  600
AGDVAPHHQH GLMSSGSGGA GSGMPGHSAT RHPDPPHALG GGAVASGGPN MCGPSAAVSG  660
GCGGLAAAAA PLEPHQHLHG SASVPWGGFG RATCGAHAGG PHGLHLQHHR HNLVPTAAAV  720
ASPAAAAAAE AAAASQGVLS NAGTANGHNL QPLLLPAHPE DPDAALWSDL CGPSSDLHRR  780
APAAGGATGA AGGSATPMQL DVECDPAGPL FGFGGSRRGS VDSLGILGCG SAGGSDSGRG  840
DGGGQFRDVA QGAMSMGPAV GASVATAGGV AMRMVVAGAG TGADAATVAA HAGRRMSLSG  900
GESAGSGRGS KRSGSSDSGR SLTYVQLTEG LRGTPKATAA VVAAAGTALS MDIGELPNDA  960
LSAYQDGDGG LLLDGWDLGL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre12.g489000.t1.1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1224033