PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID IGS.gm_1_00755
Common NameCHLNCDRAFT_133619
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
Family G2-like
Protein Properties Length: 702aa    MW: 69212.4 Da    PI: 6.1977
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
IGS.gm_1_00755genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like40.85e-131467455
         G2-like  4 lrWtpeLHerFveaveqLGGsekAtPktilelmk..vkgLtlehvkSHLQkYRl 55
                    l+W+ +L ++++ a+e+ GG + A Pk++l++++   + Ltl++vk HLQk R+
  IGS.gm_1_00755 14 LKWSDDLQDAYLAALEKCGGLQDARPKQLLDMLQpsYPFLTLQNVKNHLQKQRT 67
                    89*******************************733678************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.5E-12970IPR009057Homeodomain-like
SuperFamilySSF466895.91E-61068IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-101468IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 702 aa     Download sequence    Send to blast
MSGDDEGDHR RRYLKWSDDL QDAYLAALEK CGGLQDARPK QLLDMLQPSY PFLTLQNVKN  60
HLQKQRTKAA RHGGGGGGRA PASPGSDSQG EPMASEPTLS AGTAGTAGTA GTLGTADAPG  120
GMLGGPRPVP TIWLPDAFSA SDAQTNSLVD LAKRALALTV HQLALYRKLL EELEVDEGDH  180
AALVAALRED PTGQTVVLDA QRAASAASQG GGEDGRPARL RRLLARLLPP NPFSSGPKAE  240
AALKMAAWVA AVARHADGSG AAAGPFLAAA GGMLQPRLVA TPDAAGGASL AASATAAAPA  300
AAAAAGGPAG SSAAAAGLAG HDGAAAAAAA AAGRAGSAEM EEAPEGAAAV RRQRPDLQQR  360
RKRHKPLSEL LAEIPLQEPL HDAAQHAQQA QQAQQAQQAQ PGLPGLPPGG SAPVGMPGTS  420
PVGPAGAPLA GDTLGPTLSM QLQQHLQQQQ QHLQLQQHQA AAGGGTLLGA GQAQQAQQGM  480
GMQLEDDSMM LRALDAQASL RASYQLLPAP WIAHGACRCL RAGQSTASCC AMSSLLLQSV  540
SNALLRSAHD GGTVGEPGGE PGAGLPPPQA AAGLDAAFQA LGDEPLPAAS LDMGVLRSFL  600
DMLSSGGMSP FTSAGLPTLS ELVMAHSGGV GQAAEGQAPA GQAASGPSPP PAFLGMAGSG  660
LSGGAGGSGG SGGSGGSGGI GGGSFSAFTA PRPGGGAAGG Q*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_005851948.10.0hypothetical protein CHLNCDRAFT_133619
TrEMBLE1Z3G60.0E1Z3G6_CHLVA; Uncharacterized protein
STRINGXP_005851948.10.0(Chlorella variabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.46e-07G2-like family protein
Publications ? help Back to Top
  1. Blanc G, et al.
    The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex.
    Plant Cell, 2010. 22(9): p. 2943-55
    [PMID:20852019]