PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID maker-scaffold21216-augustus-gene-0.2-mRNA-1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family bZIP
Protein Properties Length: 192aa    MW: 21749.4 Da    PI: 7.569
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
maker-scaffold21216-augustus-gene-0.2-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.6e-1161101441
                                                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
                                        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                                                   +k++rr+++NReAAr+sR+RKka++++Le+   k ++Le+e
  maker-scaffold21216-augustus-gene-0.2-mRNA-1  61 DKVQRRLAQNREAARKSRLRKKAYVQQLETsrlKLAQLEQE 101
                                                   89***************************833344444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-854107No hitNo description
SMARTSM003384.7E-658118IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.04860104IPR004827Basic-leucine zipper domain
PfamPF001704.8E-961100IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-862105No hitNo description
PROSITE patternPS0003606580IPR004827Basic-leucine zipper domain
PfamPF141446.6E-16146192IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MGIYEPFQQV SMWGDTFKGD SIPNASTILQ VDARLENKTE FISHDSMGPS GNEQEANKPG  60
DKVQRRLAQN REAARKSRLR KKAYVQQLET SRLKLAQLEQ ELERARKQDS GTLPYSGVYI  120
CPPDTGHVGF SANVNSGIAA FEMEYAHCVE EQNRQIYAAK ADVFYLISGV WRTSAERFFH  180
WIGGFRPSEL LN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023911614.11e-119transcription factor TGA7
RefseqXP_023911615.11e-119transcription factor TGA7
SwissprotQ93ZE27e-64TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A2N9G7991e-106A0A2N9G799_FAGSY; Uncharacterized protein
STRINGXP_006472677.12e-88(Citrus sinensis)
STRINGXP_006434079.12e-88(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1971945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.13e-66bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]