PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID maker-scaffold08137-snap-gene-0.8-mRNA-1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family NAC
Protein Properties Length: 934aa    MW: 105754 Da    PI: 6.7102
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
maker-scaffold08137-snap-gene-0.8-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM142.72.1e-44151452127
                                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkky 68 
                                               p+G+rFhPtdeelv++yL+ k++g+k  + ++++ev+i+k+ePwdLp  ++++++++ew+fF+ r+ k+
  maker-scaffold08137-snap-gene-0.8-mRNA-1  15 PVGYRFHPTDEELVSYYLRLKMQGDKEYEVRAVREVNICKYEPWDLPglSAIDSDDHEWFFFCAREIKS 83 
                                               89**********************99766699***************6448888999*********999 PP

                                       NAM  69 at..gkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                                +   +r+nratk+gyWk+tg+d+++++k +++++g+kktLvf++gr p+g++t+Wv+hey+
  maker-scaffold08137-snap-gene-0.8-mRNA-1  84 FSggRSRANRATKRGYWKSTGRDRNIKVKgTNNVIGTKKTLVFHEGRVPNGRRTSWVIHEYQ 145
                                               872246899*******************967778***************************7 PP

2NAM100.13.2e-314625742127
                                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat 70 
                                               p+GfrF+Ptdeel+++yLk k++g +  + ++i e              ++++++ew+fF+ r+ ky++
  maker-scaffold08137-snap-gene-0.8-mRNA-1 462 PVGFRFRPTDEELISHYLKLKMQGGRDVEVRAIGE--------------IQSDDQEWFFFCAREIKYPN 516
                                               89**********************99444344443..............346889************** PP

                                       NAM  71 gkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                               +kr+nr t++gyWk+tg+d+ ++++ +++++g+kktLv++ gr ++g++  Wv+h+y+
  maker-scaffold08137-snap-gene-0.8-mRNA-1 517 SKRSNRLTEKGYWKSTGTDRYIKARgTNNVIGTKKTLVYHVGRGQNGVRKPWVIHQYQ 574
                                               ************************967778***************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-479164IPR003441NAC domain
PROSITE profilePS5100551.10514164IPR003441NAC domain
PfamPF023654.2E-2515145IPR003441NAC domain
SuperFamilySSF1019413.79E-40448593IPR003441NAC domain
PROSITE profilePS5100532.002461593IPR003441NAC domain
PfamPF023651.2E-22462574IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 934 aa     Download sequence    Send to blast
MTSMAYSETG LDSIPVGYRF HPTDEELVSY YLRLKMQGDK EYEVRAVREV NICKYEPWDL  60
PGLSAIDSDD HEWFFFCARE IKSFSGGRSR ANRATKRGYW KSTGRDRNIK VKGTNNVIGT  120
KKTLVFHEGR VPNGRRTSWV IHEYQPATFP PHQKAFVLCR LFKKADVRTN EAPFDDGDVS  180
SYAASDFEGQ VPGHTIPEIH EFNQVDAGLA SVHQHQRQDY DIASSLQLEE YNQQEPPDLD  240
PTFTDDLDFY VRQCLSDDSE LEKDQFVNSL FNQQDEYTFA EVRQSNDSRA PDSPITRYYD  300
GGLSSDSDTD TAQSQNQQRH MINGGTASLS NRGQYKEKRN GVDVFLGLGS SSVDSAADIP  360
HVRSLQSPPS IGAFNLQYQQ ISRPSEVQRA APSKFQLKSS SLKVVSLEKA KDASRLSITT  420
NLPQKERSIT ESDKEQKMAQ GTNADNKMTS MTSYGPGLES IPVGFRFRPT DEELISHYLK  480
LKMQGGRDVE VRAIGEIQSD DQEWFFFCAR EIKYPNSKRS NRLTEKGYWK STGTDRYIKA  540
RGTNNVIGTK KTLVYHVGRG QNGVRKPWVI HQYQPVTFNP HEKPFVLCRL FKKPDVRTNE  600
APRDDGDVSR YAASDFEGQV PGHTIPGIHE FNPEDAYLAS LLQSQHQDYD FAYSLQLEEY  660
NRPEPTAVDP IFTNGFEQNN DFANEQAEVQ FVNSFINQQD EYTIEEFRQS NDSRAPDSPI  720
TIYYDGGGLS SDSDTDTAQA QHQQMHIINS GTAFSSNHGQ YKEKRNGVVL HTSSVDSAAD  780
IRHVLSTQSQ DQRSPPSIGT LKLQYQPRSC HSVEQRAAPR KFHLKNGSLK VVSTDKAKDA  840
SRLSITTNLP QKEKSITESE KERKMAQGTN ADNSPKLKKV RSAGSDRKGS LIFQETSQKG  900
HESTPRLVYF VKILIGIFLF VVFIREMLLY GNWC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-291359514170Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023925291.10.0NAC domain-containing protein 96-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.15e-55NAC transcription factor-like 9