PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID maker-scaffold00367-augustus-gene-0.32-mRNA-1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family bZIP
Protein Properties Length: 499aa    MW: 55168 Da    PI: 7.0835
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
maker-scaffold00367-augustus-gene-0.32-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.4e-11222267446
                                                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHH CS
                                         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeaeNkaLk 46 
                                                     k  rr+++NReAAr+sR+RKka++++Le+   k ++Le+  ++L+
  maker-scaffold00367-augustus-gene-0.32-mRNA-1 222 AKTLRRLAQNREAARKSRLRKKAYVQQLETsriKLAQLEQDLQRLR 267
                                                    6889************************974336666666666666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.0E-7219296IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-8220269No hitNo description
PROSITE profilePS502179.094221265IPR004827Basic-leucine zipper domain
PfamPF001702.3E-8222265IPR004827Basic-leucine zipper domain
CDDcd147085.17E-21223273No hitNo description
SuperFamilySSF579594.44E-7223263No hitNo description
PROSITE patternPS000360226241IPR004827Basic-leucine zipper domain
PfamPF141443.4E-31304378IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MRSSYMASHR VRETGLSDSG PTNHHAPYAV FHGINAPSTS FLNQEGSAFD FGELEEAIVL  60
QGVQIRNDEA KAPLFTGRPA ATLEMFPSWP MRFQTTPGND FGLILWIHSC EEVLLGFLFQ  120
GSSKSGGEST DSGSAVNTLS SKADLAEAQL EPESPISKKA SSSDHQAFDQ KHLQQFQQQQ  180
LHQEMASDTS ITGTSQNQSA AGKAPMDKRK GTGSTSEKPL DAKTLRRLAQ NREAARKSRL  240
RKKAYVQQLE TSRIKLAQLE QDLQRLRSQG LYLGGSGGGV GNISSGAAMF DMEYARWLED  300
DHRHISELRA GLQAHLSDSD LRQIVDGNIS HYDELFRLKA VAAKSDVFHL ITGAWTSAAE  360
RCFFWMGGFR PSELIKMLIG QLDPLTEQQV MGIYSLQQSS NQAEEALIQG EEQLKQSLVD  420
TIAAGPAIDG SMHQMAIALG KLSNLEGFVR QADNLRQQTI HQLRRILTVR QAARCFLVIG  480
EYYSRLRALS SLWASRPRE
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023880411.10.0transcription factor TGA9
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A1Q3D8470.0A0A1Q3D847_CEPFO; BZIP_1 domain-containing protein/DOG1 domain-containing protein
STRINGEOY334490.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45553357
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-172bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]