PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C022945P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family GeBP
Protein Properties Length: 205aa    MW: 24174.2 Da    PI: 6.5393
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C022945P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57335.72.3e-1126118797
          DUF573   7 wseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk........aksgkepsfskehdqkifelsk 93 
                     ws+  e+ lL+ l++f++k+        ++fy f+++   ++vsk q+++Ki++LK  + +++ +        +k  ++ +  +++ ++ fels+
  MELO3C022945P1  26 WSKGEELNLLKKLVEFNSKNI-----SREEFYPFLRNGSLAEVSKIQIFDKIQQLKSEYLENKLElrkmrkrnVKL-EDDDDYNDKRDEGFELSN 114
                     ****************66554.....5799*****************************98876643232222222.2223334444689***** PP

          DUF573  94 kiWg 97 
                     ++Wg
  MELO3C022945P1 115 QLWG 118
                     ***8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.4E-926118IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MEEEKERRKS SLGSEKKKRR KSLFEWSKGE ELNLLKKLVE FNSKNISREE FYPFLRNGSL  60
AEVSKIQIFD KIQQLKSEYL ENKLELRKMR KRNVKLEDDD DYNDKRDEGF ELSNQLWGEV  120
DETERASNSK ALEVCSRNYY EGFFESCGLD VQLFDPSFHD ATKKDIDHLF NLEHHVILSK  180
AKLTAQILQL KYDLIQARVN NPTN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1620RRKSSLGSEKKKRRK
21519KKKRR
31520KKKRRK
41620KKRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819100.0LN681910.1 Cucumis melo genomic scaffold, anchoredscaffold00056.
GenBankLN7132640.0LN713264.1 Cucumis melo genomic chromosome, chr_10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0A0KPQ54e-86A0A0A0KPQ5_CUCSA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3105722