PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C010466P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family ERF
Protein Properties Length: 235aa    MW: 25978.8 Da    PI: 5.0973
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C010466P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.7e-182373155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  MELO3C010466P1 23 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 73
                    59*****998.**********9...336*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.68E-192481IPR016177DNA-binding domain
PROSITE profilePS5103221.7732481IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-302482IPR001471AP2/ERF domain
SMARTSM003802.4E-342487IPR001471AP2/ERF domain
PfamPF008471.5E-112473IPR001471AP2/ERF domain
PRINTSPR003671.6E-82536IPR001471AP2/ERF domain
CDDcd000182.46E-182782No hitNo description
PRINTSPR003671.6E-84763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MVKKVEKTAE KSSLAPPPPP CKKKYKGVRM RSWGSWVSEI RAPNQKTRIW LGSYSTPEAA  60
ARAYDAALLC LKGASASLNF PEIANSIQTF DNNRHFRRHH HIDTSDDAIM SPKSIQRFAA  120
AAANGFPDNV GTVVSPPSSA VSSPSPSTST SSTPSDQPDD DMSVIVTSNG FYNDQFDHPT  180
AEMESWCNYF DALQSPKYID QIFTDGWLDF DSIAEGKIDH FDEEESDIRL WSFC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818670.0LN681867.1 Cucumis melo genomic scaffold, anchoredscaffold00013.
GenBankLN7132610.0LN713261.1 Cucumis melo genomic chromosome, chr_7.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008444140.11e-175PREDICTED: ethylene-responsive transcription factor ERF014
TrEMBLA0A1S3BAF21e-173A0A1S3BAF2_CUCME; ethylene-responsive transcription factor ERF014
STRINGXP_008444140.11e-174(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47983156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.13e-32ERF family protein