PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla002713
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family NAC
Protein Properties Length: 625aa    MW: 71148 Da    PI: 4.3881
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla002713genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM576.5e-18241591128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyatgk....rknra..tksgyWkatgkdkev 92 
                lp GfrF Ptde lv +yL +k++g + +   v+ ++d+y + ePwd+ +++ + + +++yfF+k +++++++     + nr+   ++g+W+   + + +
  Cla002713  24 LPIGFRFMPTDEILVEHYLFNKIHGFPYSQ-AVVFDCDLYGLiEPWDIWNSFGGvDGQDLYFFTKLKRSTTKSGnlsaHINRKigSADGTWSGENSATLI 122
                699************************888.889******866*****854443377899*****99988864324445666523459****99999999 PP

        NAM  93 lsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++  +++ +   k + +  +     ++ +W+mhey+l
  Cla002713 123 SRTgrDDQIIAYCKRFRYE-NPYLLDHHGEWIMHEYSL 159
                8876566668888888886.555556899*******98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-2516180IPR003441NAC domain
PROSITE profilePS5100526.6924181IPR003441NAC domain
PfamPF023656.3E-1525159IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 625 aa     Download sequence    Send to blast
MATAEVLGIP CTPIMEHSLL QKILPIGFRF MPTDEILVEH YLFNKIHGFP YSQAVVFDCD  60
LYGLIEPWDI WNSFGGVDGQ DLYFFTKLKR STTKSGNLSA HINRKIGSAD GTWSGENSAT  120
LISRTGRDDQ IIAYCKRFRY ENPYLLDHHG EWIMHEYSLH DSFVMPNCSN SNYVLCRLRK  180
NERPKRKATV NNKCSSKLQS MKKRVIAPMI INDMTGKNNE NEKPKRKVNK RCISKLLPEK  240
QRVVTPTIIC NIPCGPKTTT NQGISDYEPR MINDEIELQG SDMTIDQCTS DVPYKPQMTN  300
DEIELQGSHM TISQCISDVP YKSQVTNDEI ELQWSDMTIS QCTSDVPHKP QMTNDEIELQ  360
GSDMVTSQGR SDVPCKPHND EIELRVSDMT TNQGTGDVLW ASEMKQDTSD VVSCLPEMIS  420
DEIPLWESYL TTNQNTSDVF CVLEMNQSTS IVPYSLEFTT DKTKPRVPDM TTHQETTNVF  480
YTPEMNQDTD YIVSCLPEMT TDEIEPWVSD LTNKQDTGDV LWALERKQGT SDIASCLPEM  540
TSDEIEFWVS DFTTKQDTND VFRAPEMKQG TNDVVSYLPE MTSDEIEHWM SDLVTKQDTD  600
DVLWAPEMKQ GTNDIVSCLP GMTND
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183189PKRKATV
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.15e-14vascular related NAC-domain protein 7