PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cagra.3271s0004.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
Family bZIP
Protein Properties Length: 150aa    MW: 16920 Da    PI: 8.9843
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cagra.3271s0004.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.61e-061783463
                         XCHHHCHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeie.......eLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                          k+ +rk +NRe+ArrsR++K++++e        Le+++ke  +  k  k++l++ ++e a l+se+
  Cagra.3271s0004.1.p 17 EKKRKRKLSNRESARRSRLKKQKQMEdtiheisSLERRIKENGERCKVVKERLDSVENENALLRSEK 83
                         5999******************977622222226888888888888888888888888888887775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-81397No hitNo description
SMARTSM003382.6E-81478IPR004827Basic-leucine zipper domain
PfamPF077165.8E-71655IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.0591679IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.11E-61869No hitNo description
CDDcd147026.11E-121970No hitNo description
PROSITE patternPS0003602136IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006521Biological Processregulation of cellular amino acid metabolic process
GO:0009267Biological Processcellular response to starvation
GO:0009617Biological Processresponse to bacterium
GO:0009651Biological Processresponse to salt stress
GO:0009901Biological Processanther dehiscence
GO:0010182Biological Processsugar mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MANAEKTTTS SGSDIDEKKR KRKLSNRESA RRSRLKKQKQ MEDTIHEISS LERRIKENGE  60
RCKVVKERLD SVENENALLR SEKTWLSSYV SDLENMIATT TLTLTHSGGG GCDEDENANA  120
EIAVGDCRRR RPWKLLSCDS LQPMASFKT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11623EKKRKRKL
21722KKRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006281254.14e-91hypothetical protein CARUB_v10027299mg
SwissprotQ9FGX27e-84BZIP1_ARATH; Basic leucine zipper 1
TrEMBLR0EXZ54e-91R0EXZ5_9BRAS; Uncharacterized protein
STRINGAT5G49450.12e-81(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM125812231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49450.11e-79basic leucine-zipper 1