PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_47016
Common NameKK1_047804
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 245aa    MW: 27239.4 Da    PI: 9.0984
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_47016genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.00092110132123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    y+C+ C+++F++   L  H  +H
  C.cajan_47016 110 YQCKTCNRCFPSFQALGGHRASH 132
                    9***********99999998887 PP

2zf-C2H214.10.00014150172123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C++Cg  Fs+   L  H+r+H
  C.cajan_47016 150 HECSICGAEFSSGQALGGHMRRH 172
                    78********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.11E-9109172No hitNo description
PROSITE profilePS5015710.221110137IPR007087Zinc finger, C2H2
SMARTSM003550.08110132IPR015880Zinc finger, C2H2-like
PfamPF139122.2E-10110134IPR007087Zinc finger, C2H2
PROSITE patternPS000280112132IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.605.8E-4146172IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139125.9E-13149174IPR007087Zinc finger, C2H2
SMARTSM003550.01150172IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.743150172IPR007087Zinc finger, C2H2
PROSITE patternPS000280152172IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MQLQQEFLVV SKDDTQMIIK GKRTKRQRAP SPLRLLMPNS TSSSTNNSNS IDSTTTTTTI  60
ELRQDEDMAN CLILLAQGRH HVTAPASRHD DNENNNDNND DNKSTRLYLY QCKTCNRCFP  120
SFQALGGHRA SHKKPRQNTG TVSTTKAKAH ECSICGAEFS SGQALGGHMR RHRSLVHASM  180
TTSMSGGNVV AGGSGSHEYQ EAKKPFKLDL NLPAPDDDHR ESKFSFQQRE KVIVFSKSSL  240
VDCHY
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_47016
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020208777.11e-151zinc finger protein ZAT5
TrEMBLA0A151QN480.0A0A151QN48_CAJCA; Zinc finger protein 1
STRINGGLYMA10G06760.21e-104(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58634141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03510.12e-47C2H2 family protein