PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_43151
Common NameKK1_041307
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 316aa    MW: 35599.5 Da    PI: 4.8702
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_43151genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.6e-12148191654
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  C.cajan_43151 148 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 191
                    589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491142191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-15145206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-9148191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-12148197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-15149204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.55E-5149195No hitNo description
CDDcd048730.00152242282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MELSQLGFLD ELVAPRRDTW NAFSTAFCDL LPNAWTFDSF LETPSLPPFP ALDRRFECPY  60
STQVPPSYPF SDAFAMPLSD DPPPLPPSLQ AQEVAFRDNT HFGETKGVCK VEEQGTEVVV  120
PLFNVGLCDD RDRKPKPKKL EGQPSKNLMA ERRRRKRLND RLSMLRSIVP KISKMDRTSI  180
LGDTIDYMKE LLERIGKLQE EEGEEGTSQM NLLGFSKEQL KPNEAIVRNS PKFDVERRDQ  240
DTRISICCAT KPGLLLSTVN TLEALGLEIQ QCVISSFNDF SMEASCSEVA EQRNCISHEE  300
IKQALSRNAG FGGKCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150157ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007156443.11e-169hypothetical protein PHAVU_003G286400g
SwissprotQ9LSL17e-87BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A151R4Q70.0A0A151R4Q7_CAJCA; Transcription factor bHLH93
STRINGGLYMA08G37240.11e-148(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.19e-85beta HLH protein 93