PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41132
Common NameKK1_036725
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 94aa    MW: 10569 Da    PI: 10.0251
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41132genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.4e-0922611554
                   HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                   +i +  ++L++l+P++ + +s K+s + +L+++++YIk+L
  C.cajan_41132 22 QITDLVSKLQQLIPELRARRSDKVSASKVLQETCNYIKNL 61
                   6889999********879********************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.981761IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-92283IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.9E-92276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-62261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009416Biological Processresponse to light stimulus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    Send to blast
MSTRRSRSRQ QSGVPTEITD AQITDLVSKL QQLIPELRAR RSDKVSASKV LQETCNYIKN  60
LHREVDDLSD RLSQLLATTD SNSAQAAIIR SLLM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150342e-59AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014507668.14e-52PREDICTED: transcription factor PRE6-like
SwissprotQ8GW324e-41PRE6_ARATH; Transcription factor PRE6
TrEMBLA0A151RGX84e-61A0A151RGX8_CAJCA; Transcription factor bHLH135 family
STRINGGLYMA08G41000.14e-51(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56734143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.13e-42bHLH family protein