PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40405
Common NameKK1_043320
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 160aa    MW: 18058.9 Da    PI: 8.7314
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40405genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.46e-061133123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   + C +C+k F++k +L  H+r+H
  C.cajan_40405 11 FICCICKKDFPSKKSLYGHMRSH 33
                   89********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.8E-51035No hitNo description
PfamPF139127.2E-61135IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.6371138IPR007087Zinc finger, C2H2
SMARTSM003550.00691133IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002801333IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MLSVVTTCDK FICCICKKDF PSKKSLYGHM RSHSAANRKG IHPSTSMEEN KSYDHLNVGV  60
APDEEPKPKR LKMQPILHRT TDKDEEIVYG EEEIIAAQIL VSMSHDTWPC DVPFPRIKNN  120
EKGVSNSVVV EDIPSTSGVK VQVSQPKVRR LIVKLKNPYI
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40405
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027368554.12e-25uncharacterized protein LOC113874531
TrEMBLA0A151QZH31e-115A0A151QZH3_CAJCA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97372437