PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_39843
Common NameKK1_039254
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 157aa    MW: 17087.4 Da    PI: 6.5278
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_39843genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-191868255
            AP2  2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55
                   +y+GVr+++ +g+++AeIrd      ++ +r +lg+f taeeAa+a+++a+ +++g
  C.cajan_39843 18 KYRGVRRRP-WGKFAAEIRD----SlRHgQRLWLGTFNTAEEAARAYDRAAYAMRG 68
                   8********.**********....33236*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.27E-181877No hitNo description
SuperFamilySSF541713.73E-241878IPR016177DNA-binding domain
SMARTSM003801.8E-361882IPR001471AP2/ERF domain
PROSITE profilePS5103223.6961876IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-311878IPR001471AP2/ERF domain
PfamPF008471.1E-141868IPR001471AP2/ERF domain
PRINTSPR003672.8E-111930IPR001471AP2/ERF domain
PRINTSPR003672.8E-114258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MDEGGSRGKG KDEEEHVKYR GVRRRPWGKF AAEIRDSLRH GQRLWLGTFN TAEEAARAYD  60
RAAYAMRGPF AVLNFPHEYP PSAASSSSSS SSNASSSSSS SSASSSASAS ASSASAPSSS  120
LARGSNEQSN QVFEFEYYDE KLLEELLGYE EKTKHDK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-3711421114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_39843
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203093.11e-108ethylene-responsive transcription factor ERF096
SwissprotQ9LTC52e-37ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A151RA661e-107A0A151RA66_CAJCA; Ethylene-responsive transcription factor ERF098 family
STRINGGLYMA02G00890.13e-51(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.16e-27ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]