PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_39702
Common NameKK1_041386
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 246aa    MW: 27271 Da    PI: 4.1833
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_39702genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-181362255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ykGVr++  +g+WvAeIr+p   + r +r +lg+f t  +Aa a++aa+kkl+g
  C.cajan_39702 13 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFETSRDAALAYDAAAKKLYG 62
                   69****999.**********8...3.35*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.38E-191272No hitNo description
SMARTSM003801.3E-331376IPR001471AP2/ERF domain
PROSITE profilePS5103222.0231370IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-291371IPR001471AP2/ERF domain
PfamPF008471.7E-131362IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-201370IPR016177DNA-binding domain
PRINTSPR003672.3E-91425IPR001471AP2/ERF domain
PRINTSPR003672.3E-93652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MRGKGGPENA ACTYKGVRQR TWGKWVAEIR EPNRGARLWL GTFETSRDAA LAYDAAAKKL  60
YGSDAKLNLP EVHQPPNSNP PPSPPTPQMS PQPQIHNTTF DVVPDVNPSD FTNNMVNSNN  120
PVLSMASHQV GDVPVYTSDS IVSLPFETTH NNVTLPYETI NDHVSLPYGT NTHTNFSFYS  180
NSFWGMMNET VPMLDESIWT DDAMTLDFPF VADDEIFGTG NFPDVGGWNY GEDDNVDDNS  240
PPPPWM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-201470360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_39702
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150368e-37AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020204846.14e-96ethylene-responsive transcription factor ERF043
TrEMBLA0A151R4J90.0A0A151R4J9_CAJCA; Dehydration-responsive element-binding protein 2D
STRINGGLYMA06G03110.12e-59(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25623380
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.13e-31ERF family protein