PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_38744
Common NameKK1_040717
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 191aa    MW: 21347.9 Da    PI: 9.2976
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_38744genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH382.9e-12749754
                   HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                   ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A+eY+k+L
  C.cajan_38744  7 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 49
                   79*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.98149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-17570IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.2E-14655IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-10649IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.06E-11753No hitNo description
Gene3DG3DSA:4.10.280.101.6E-16762IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550217.9E-5118185No hitNo description
CDDcd048731.04E-7120180No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MPAKNLMAER RRRKKLNDRL YMLRSVVPKI SKMDRASILG DAIEYLKELL QRINDLHNEL  60
ESTPAGSALT PVSTFHPLTP TPPTLPSRIK EELCPSSLPS PNGQPARVEV RLREGRAVNI  120
HMFCARKPGL LLSTMRALDN LGLDIQQAVI SCFNGFAMDI FRAEQCKEGQ DVHPEQIKAV  180
LLDSAGYNGM M
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815ERRRRKKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM9899280.0HM989928.1 Glycine max ICEd mRNA, complete cds.
GenBankFJ3932260.0FJ393226.1 Glycine max inducer of CBF expression 4 (ICE4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013461649.11e-130BHLH transcriptional factor
SwissprotQ9LSE21e-116ICE1_ARATH; Transcription factor ICE1
TrEMBLA0A151R5Y71e-140A0A151R5Y7_CAJCA; Transcription factor ICE1
STRINGGLYMA06G17330.21e-125(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24143482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.41e-110bHLH family protein